Chlamydomonas sp. RCC443
Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
- Scientific name accepted: Chlamydomonas
- Authority: Ehrenberg, 1833
- Phylum: Chlorophyta
- Genus: Chlamydomonas
- Ploidy: Unknown
PhyloPic color code:
Species match
Genus match
Family and above match
- Collect event: CC-ROSCOFF
- Coordinator(s): HERVÉOU Katell
- Operator(s): Unknown
- Taxonomist(s): LE GALL Florence
- Date: June 1, 1997
- Site (sea): Atlantic Ocean
- Site (region): Roscoff
- Latitude: 48.72 / 48°43'12.0"N
- Longitude: 3.98 / 3°58'48.0"W
- ENA BioProject of the sequencing raw data: PRJEB127843
- ENA BioProject of the genome assembly: PRJEB127844
- Assembly accession: GCA_988451325
- EAR report with genome assembly metrics: PDF
- Size: 100.36 Mbp
- GC content: 63.26%
- Number of chromosomes: 31
- Number of scaffolds: 35
- N50 of scaffolds: 3.49 Mbp
- L50 of scaffolds: 13
- Number of contigs: 73
- N50 of contigs: 2.2 Mbp
- L50 of contigs: 16
- Protein-coding genes: Undetermined
- Gene length (average): Undetermined
- Gene length (median): Undetermined
- CDS length (average): Undetermined
- CDS length (median): Undetermined
- CDS proportion (genome): Undetermined
- Genes without introns: Undetermined
- Number of contigs with at least one gene (genome): Undetermined
- Number of contigs with at least one gene (bases): Undetermined
BUSCO structural annotations completeness
BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)
Genome
- Single-copy genes: Undetermined
- Duplicated genes: Undetermined
- Fragmented genes: Undetermined
- Missing genes: Undetermined
Proteins
- Single-copy genes: Undetermined
- Duplicated genes: Undetermined
- Fragmented genes: Undetermined
- Missing genes: Undetermined