Myrichthys ocellatus

Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
  • Scientific name accepted: Myrichthys ocellatus
  • Authority: (Lesueur, 1825)
  • Phylum: Chordata
  • Genus: Myrichthys
  • Species: Myrichthys ocellatus
  • Sex: Male
  • Ploidy: Unknown
  • Common name: No common name known
  • Collect event: MI-KARUBENTHOS3
  • Coordinator(s): Laure Corbari
  • Operator(s): FLOC'H Nicolas, GOUILLIEUX Benoît, HOURDEZ Stéphane, LE GALL Line, ORTIZ Katia, VASSARD Emmanuel
  • Taxonomist(s): Katia Ortiz
  • Date: Sept. 27, 2024
  • Site (sea): Atlantic Ocean
  • Site (region): Passe du Souffleur
  • Latitude: 15.83623
  • Longitude: -61.61392

World occurrences from GBIF

  • ENA BioProject of the sequencing raw data: PRJEB90896
  • ENA BioProject of the genome assembly: PRJEB90897
  • Assembly accession: GCA_975146105
  • EAR report with genome assembly metrics: PDF
  • Assembly ploidy: Not communicated
  • Sequencing: Not communicated
  • Size: 1.52 Gbp
  • GC content: 42.81%
  • Number of chromosomes: 19
  • Number of scaffolds: 38
  • N50 of scaffolds: 95.4 Mbp
  • L50 of scaffolds: 7
  • Number of contigs: 185
  • N50 of contigs: 47.18 Mbp
  • L50 of contigs: 9
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

BUSCO structural annotations completeness

BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)

Genome

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined