Parasalenia gratiosa

goat
bioproject_species
Genome portal
Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
  • Scientific name accepted: Parasalenia gratiosa
  • Authority: A. Agassiz, 1863
  • Phylum: Echinodermata
  • Genus: Parasalenia
  • Sex: Female
  • Ploidy: Unknown
PhyloPic color code: Species match Genus match Family and above match
  • Collect event: MI-KANAMECO 2024
  • Coordinator(s): PUILLANDRE Nicolas | SARAH Samadi
  • Operator(s): Unknown
  • Taxonomist(s): HOURDEZ Stéphane
  • Date: March 13, 2024
  • Site (sea): Pacific Ocean
  • Site (region): Province Sud | Îlot Amédée | Grand Récif Aboré | Réserve naturelle
  • Latitude: 22.4576 / 22°27'27.4"S
  • Longitude: 166.37353 / 166°22'24.7"E

No occurrence data available from GBIF

  • ToLID prefix: wjParGratt
  • Genome data portal (pending)
  • GoaT
  • WoRMS
  • NCBI
  • GBIF (pending)
  • OBIS
  • INPN (pending)
  • OpenObs (pending)
  • ENA BioProject of the sequencing raw data: PRJEB114523
  • ENA BioProject of the genome assembly: PRJEB114524
  • Assembly accession: GCA_988434825
  • EAR report with genome assembly metrics: PDF
  • Size: 996.3 Mbp
  • GC content: 37.96%
  • Number of chromosomes: 21
  • Number of scaffolds: 61
  • N50 of scaffolds: 46.22 Mbp
  • L50 of scaffolds: 10
  • Number of contigs: 268
  • N50 of contigs: 7.29 Mbp
  • L50 of contigs: 44
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

BUSCO structural annotations completeness

BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)

Genome

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined