Pseudochloris sp. RCC4743

goat
bioproject_species_not_available Pending
Genome portal
Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
  • Scientific name accepted: Pseudochloris sp. RCC4743
  • Authority: B.Somogyi, T.Felföldi & L.Vörös, 2013
  • Phylum: Chlorophyta
  • Genus: Pseudochloris
  • Species: Pseudochloris sp. RCC4743
  • Ploidy: Unknown
  • Common name: No common name known
  • Collect event: CC-Roscoff
  • Coordinator(s): Katell Hervéou
  • Operator(s): Nigel Grimsley
  • Taxonomist(s): Nigel Grimsley
  • Date: Dec. 11, 2006
  • Site (sea): Mediterranean Sea
  • Site (region): Lapalme lagoon
  • Latitude: 42.97
  • Longitude: 3.0

No occurrence data available from GBIF

  • Pseudochloris sp. RCC4743 archive: pending
  • Genome data portal (pending)
  • GoaT
  • WoRMS
  • NCBI
  • GBIF (pending)
  • OBIS
  • INPN (pending)
  • OpenObs (pending)
  • ENA BioProject of the sequencing raw data: Pending
  • ENA BioProject of the genome assembly: Pending
  • Assembly accession: Pending
  • EAR report with genome assembly metrics: pending
  • Assembly ploidy: Not communicated
  • Sequencing: Not communicated
  • Size: Undetermined
  • GC content: Undetermined
  • Number of chromosomes: Undetermined
  • Number of scaffolds: Undetermined
  • N50 of scaffolds: Undetermined
  • L50 of scaffolds: Undetermined
  • Number of contigs: Undetermined
  • N50 of contigs: Undetermined
  • L50 of contigs: Undetermined
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

BUSCO structural annotations completeness

BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)

Genome

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined