Syllis parapari

goat
bioproject_species
Genome portal
Access to genome browser and other tools for the genome - Pending
Resampling required
Sample collected
Sample acquired
Data generation
In assembly
Submitted
Insdc open
  • Scientific name accepted: Syllis parapari
  • Authority: San Martín & López, 2000
  • Phylum: Annelida
  • Genus: Syllis
  • Ploidy: Unknown
PhyloPic color code: Species match Genus match Family and above match
  • Collect event: MI-DIVE-SEA_DINARD
  • Coordinator(s): Line Le Gall
  • Operator(s): AUBIN Sébastien, BED'HOM Bertrand, LAMOUREUX Jézabel, LE GOFF Loïc, MERLET Antoine
  • Taxonomist(s): Gabin Droual
  • Date: June 26, 2024
  • Site (sea): Atlantic Ocean
  • Site (region): Proche de l'île des Hébihens
  • Latitude: 48.6386 / 48°38'19.0"N
  • Longitude: 2.1969 / 2°11'48.8"W
  • MNHN collection

No occurrence data available from GBIF

  • ToLID prefix: wpSylPara
  • Genome data portal (pending)
  • GoaT
  • WoRMS
  • NCBI
  • GBIF (pending)
  • OBIS
  • INPN (pending)
  • OpenObs (pending)
  • ENA BioProject of the sequencing raw data: PRJEB122885
  • ENA BioProject of the genome assembly: PRJEB122886
  • Assembly accession: GCA_988282215
  • EAR report with genome assembly metrics: pending
  • Size: 912.89 Mbp
  • GC content: 38.0%
  • Number of chromosomes: 13
  • Number of scaffolds: 78
  • N50 of scaffolds: 72.1 Mbp
  • L50 of scaffolds: 6
  • Number of contigs: 431
  • N50 of contigs: 4.22 Mbp
  • L50 of contigs: 66
  • Protein-coding genes: Undetermined
  • Gene length (average): Undetermined
  • Gene length (median): Undetermined
  • CDS length (average): Undetermined
  • CDS length (median): Undetermined
  • CDS proportion (genome): Undetermined
  • Genes without introns: Undetermined
  • Number of contigs with at least one gene (genome): Undetermined
  • Number of contigs with at least one gene (bases): Undetermined

BUSCO structural annotations completeness

BUSCO v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)v6.0.0 (euk_genome_min, miniprot), lineage: eukaryota_odb12 (genomes: 456, BUSCOs: 129)

Genome

  • Single-copy genes: 96.9%
  • Duplicated genes: 0.8%
  • Fragmented genes: 0.0%
  • Missing genes: 2.3%

Proteins

  • Single-copy genes: Undetermined
  • Duplicated genes: Undetermined
  • Fragmented genes: Undetermined
  • Missing genes: Undetermined